STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95718.1ABC transporter, ATP-binding protein. (300 aa)    
Predicted Functional Partners:
ALP95719.1
Transcriptional regulator, GntRNA family.
 
  
 0.935
ALP95717.1
Hypothetical protein.
 
     0.923
ecfA
ATPase component of ECF transporter; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.866
ALP93713.1
Hypothetical protein.
  
 
 0.780
ALP95590.1
Branched-chain amino acid transport ATP-binding protein LivF; TC 3.A.1.4.1.
 
     
0.682
ALP93733.1
Hypothetical protein.
  
 
 0.652
ALP93734.1
Hypothetical protein.
  
 
 0.652
ALP92668.1
Branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.1.
    
0.649
ALP94354.1
Hypothetical protein.
  
  
 0.561
ALP92773.1
Transcriptional regulator, GntRNA family.
  
 0.458
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.