STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKQ63169.1AttE component of AttEFGH ABC transport system. (240 aa)    
Predicted Functional Partners:
AKQ63168.1
AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system.
 
 
 0.932
AKQ65787.1
ABC transporter permease protein.
 
 0.915
AKQ65821.1
Cell division protein FtsX.
 
 0.832
AKQ63167.1
AttH component of AttEFGH ABC transport system.
  
  
 0.829
AKQ70000.1
Cell division protein FtsX.
 
 0.829
AKQ64560.1
Cell division protein FtsH; Belongs to the AAA ATPase family.
  
     0.752
AKQ65820.1
Cell division protein FtsX.
 
 0.746
AKQ69999.1
Cell division protein FtsX.
 
 0.718
AKQ67701.1
Hypothetical protein.
 
 
 0.691
AKQ68596.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.653
Your Current Organism:
Myxococcus hansupus
NCBI taxonomy Id: 1297742
Other names: M. hansupus, Myxococcus sp. (contaminant ex DSM 436), Myxococcus sp. mixupus
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