STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF10435.1Nitrogenase molybdenum-iron protein beta chain; Belongs to the NifD/NifK/NifE/NifN family. (459 aa)    
Predicted Functional Partners:
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.975
SHF10563.1
Nitrogen fixation protein NifB.
  
 0.969
SHF10380.1
Nitrogenase molybdenum-iron protein alpha chain.
  
  0.959
SHF10291.1
Nitrogen regulatory protein P-II family.
 
 
 0.822
SHF10340.1
Nitrogen regulatory protein P-II family.
 
 
 0.789
SHF10597.1
(2Fe-2S) ferredoxin.
 
     0.773
SHF10474.1
Nitrogenase molybdenum-cofactor synthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
    
0.706
SHF10515.1
Nitrogenase molybdenum-iron protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
 
    
0.523
SHF10637.1
Homocitrate synthase NifV; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
  
 0.511
SHF10124.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  
 0.421
Your Current Organism:
Bacteroides luti
NCBI taxonomy Id: 1297750
Other names: B. luti, Bacteroides luti Hatamoto et al. 2014, Bacteroides sp. UasXn-3, DSM 26991, JCM 19020, strain UasXn-3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.