STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF49689.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (382 aa)    
Predicted Functional Partners:
SHF49724.1
UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase.
  
 0.970
SHF49658.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.932
SHE35224.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.861
SHE34284.1
Predicted dehydrogenase.
 
 
 0.842
SHF49630.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.841
SHE80419.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.790
SHF49599.1
Protein of unknown function.
       0.525
SHF49570.1
Hypothetical protein.
       0.522
SHE80952.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.521
SHE80468.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 
0.490
Your Current Organism:
Bacteroides luti
NCBI taxonomy Id: 1297750
Other names: B. luti, Bacteroides luti Hatamoto et al. 2014, Bacteroides sp. UasXn-3, DSM 26991, JCM 19020, strain UasXn-3
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