rpmF protein (Bacteroides luti) - STRING interaction network

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second shell of interactors

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gene neighborhood

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Score

rpmF

LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. (61 aa)

Predicted Functional Partners:

rpmB

0.987

rplU

0.987

rplL

0.987

rpsP

0.987

rpsF

0.987

rplS

0.987

rpmI

0.987

rpsO

0.986

rpsT

0.986

rplK

0.986

Your Current Organism:

Bacteroides luti

NCBI taxonomy Id: 1297750
Other names: B. luti, Bacteroides luti Hatamoto et al. 2014, Bacteroides sp. UasXn-3, DSM 26991, JCM 19020, strain UasXn-3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplK	rplL	SAMN05444405_111104	SAMN05444405_111101	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.998
rplK	rplS	SAMN05444405_111104	SAMN05444405_11912	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.987
rplK	rplU	SAMN05444405_111104	SAMN05444405_10473	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.986
rplK	rpmB	SAMN05444405_111104	SAMN05444405_101120	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.983
rplK	rpmF	SAMN05444405_111104	SAMN05444405_11774	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.986
rplK	rpmI	SAMN05444405_111104	SAMN05444405_1307	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.986
rplK	rpsF	SAMN05444405_111104	SAMN05444405_11568	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.987
rplK	rpsO	SAMN05444405_111104	SAMN05444405_1057	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987
rplK	rpsP	SAMN05444405_111104	SAMN05444405_1135	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.986
rplK	rpsT	SAMN05444405_111104	SAMN05444405_106122	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.969
rplL	rplK	SAMN05444405_111101	SAMN05444405_111104	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.998
rplL	rplS	SAMN05444405_111101	SAMN05444405_11912	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.988
rplL	rplU	SAMN05444405_111101	SAMN05444405_10473	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.986
rplL	rpmB	SAMN05444405_111101	SAMN05444405_101120	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.984
rplL	rpmF	SAMN05444405_111101	SAMN05444405_11774	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.987
rplL	rpmI	SAMN05444405_111101	SAMN05444405_1307	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.984
rplL	rpsF	SAMN05444405_111101	SAMN05444405_11568	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.986
rplL	rpsO	SAMN05444405_111101	SAMN05444405_1057	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987
rplL	rpsP	SAMN05444405_111101	SAMN05444405_1135	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.988
rplL	rpsT	SAMN05444405_111101	SAMN05444405_106122	LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.974