STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000497635_03591Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_000497635_01600
Unannotated protein.
    
 0.990
GCA_000497635_03590
Unannotated protein.
 
 0.976
GCA_000497635_02782
Unannotated protein.
   
 0.975
GCA_000497635_04486
Unannotated protein.
  
 0.915
GCA_000497635_03593
Unannotated protein.
    
  0.868
GCA_000497635_04302
Unannotated protein.
  
 0.848
GCA_000497635_00154
Unannotated protein.
   
 0.802
GCA_000497635_00754
Unannotated protein.
    
 0.772
GCA_000497635_01024
Unannotated protein.
    
  0.761
GCA_000497635_01601
Unannotated protein.
    
  0.761
Your Current Organism:
Afipia sp. OHSUIC4
NCBI taxonomy Id: 1297863
Other names: A. sp. OHSU_I-C4, Afipia sp. OHSU_I-C4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.