Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001312465_01399 | GCA_001312465_01403 | GCA_001312465_01399 | GCA_001312465_01403 | Unannotated protein. | Unannotated protein. | 0.445 |
GCA_001312465_01399 | trpA | GCA_001312465_01399 | GCA_001312465_01398 | Unannotated protein. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.999 |
GCA_001312465_01399 | trpB | GCA_001312465_01399 | GCA_001312465_01400 | Unannotated protein. | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.993 |
GCA_001312465_01399 | trpC | GCA_001312465_01399 | GCA_001312465_01401 | Unannotated protein. | Unannotated protein; Belongs to the TrpC family. | 0.999 |
GCA_001312465_01399 | trpD | GCA_001312465_01399 | GCA_001312465_01402 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.993 |
GCA_001312465_01403 | GCA_001312465_01399 | GCA_001312465_01403 | GCA_001312465_01399 | Unannotated protein. | Unannotated protein. | 0.445 |
GCA_001312465_01403 | trpA | GCA_001312465_01403 | GCA_001312465_01398 | Unannotated protein. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.445 |
GCA_001312465_01403 | trpB | GCA_001312465_01403 | GCA_001312465_01400 | Unannotated protein. | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.459 |
GCA_001312465_01403 | trpC | GCA_001312465_01403 | GCA_001312465_01401 | Unannotated protein. | Unannotated protein; Belongs to the TrpC family. | 0.773 |
GCA_001312465_01403 | trpD | GCA_001312465_01403 | GCA_001312465_01402 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.773 |
trpA | GCA_001312465_01399 | GCA_001312465_01398 | GCA_001312465_01399 | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Unannotated protein. | 0.999 |
trpA | GCA_001312465_01403 | GCA_001312465_01398 | GCA_001312465_01403 | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Unannotated protein. | 0.445 |
trpA | trpB | GCA_001312465_01398 | GCA_001312465_01400 | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.999 |
trpA | trpC | GCA_001312465_01398 | GCA_001312465_01401 | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Unannotated protein; Belongs to the TrpC family. | 0.999 |
trpA | trpD | GCA_001312465_01398 | GCA_001312465_01402 | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.997 |
trpB | GCA_001312465_01399 | GCA_001312465_01400 | GCA_001312465_01399 | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Unannotated protein. | 0.993 |
trpB | GCA_001312465_01403 | GCA_001312465_01400 | GCA_001312465_01403 | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Unannotated protein. | 0.459 |
trpB | trpA | GCA_001312465_01400 | GCA_001312465_01398 | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.999 |
trpB | trpC | GCA_001312465_01400 | GCA_001312465_01401 | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Unannotated protein; Belongs to the TrpC family. | 0.999 |
trpB | trpD | GCA_001312465_01400 | GCA_001312465_01402 | Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | Unannotated protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.993 |
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