STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312525_00266Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_001312525_00265
Unannotated protein.
     0.994
GCA_001312525_03152
Unannotated protein.
 
 
 0.954
GCA_001312525_03153
Unannotated protein.
 
 
 0.952
GCA_001312525_00291
Unannotated protein.
 
 
 0.936
GCA_001312525_03151
Unannotated protein.
 
 
 0.904
GCA_001312525_00264
Unannotated protein.
 
  
 0.864
GCA_001312525_00260
Unannotated protein.
 
   
 0.792
GCA_001312525_00267
Unannotated protein.
    
  0.787
GCA_001312525_00259
Unannotated protein.
 
 
 0.781
GCA_001312525_00257
Unannotated protein.
 
   
 0.766
Your Current Organism:
Dysgonomonas hofstadii
NCBI taxonomy Id: 1298597
Other names: D. hofstadii JCM 17038, Dysgonomonas hofstadii CCUG 54731, Dysgonomonas hofstadii JCM 17038, Dysgonomonas sp. CCUG 54731
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.