STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312525_03756Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_001312525_01074
Unannotated protein.
   
 0.712
GCA_001312525_03847
Unannotated protein.
    
  0.685
GCA_001312525_03848
Unannotated protein.
    
  0.685
GCA_001312525_03757
Unannotated protein.
       0.613
GCA_001312525_03755
Unannotated protein.
       0.554
GCA_001312525_01481
Unannotated protein.
   
 
  0.465
GCA_001312525_03758
Unannotated protein.
       0.448
GCA_001312525_02781
Unannotated protein.
    
 0.409
Your Current Organism:
Dysgonomonas hofstadii
NCBI taxonomy Id: 1298597
Other names: D. hofstadii JCM 17038, Dysgonomonas hofstadii CCUG 54731, Dysgonomonas hofstadii JCM 17038, Dysgonomonas sp. CCUG 54731
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.