Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAE92308.1 | GAE93262.1 | JCM21714_1297 | JCM21714_2329 | Diguanylate cyclase/phosphodiesterase. | Two-component response regulator. | 0.898 |
GAE92308.1 | GAE93934.1 | JCM21714_1297 | JCM21714_3055 | Diguanylate cyclase/phosphodiesterase. | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | 0.999 |
GAE92308.1 | GAE93935.1 | JCM21714_1297 | JCM21714_3056 | Diguanylate cyclase/phosphodiesterase. | Hypothetical protein. | 0.999 |
GAE92308.1 | GAE93937.1 | JCM21714_1297 | JCM21714_3058 | Diguanylate cyclase/phosphodiesterase. | serine/Threonine protein kinase and Signal Transduction Histidine Kinase with GAF and PAS/PAC sensor. | 0.999 |
GAE92308.1 | GAE94306.1 | JCM21714_1297 | JCM21714_3453 | Diguanylate cyclase/phosphodiesterase. | Sensory box histidine kinase. | 0.999 |
GAE92308.1 | GAE94783.1 | JCM21714_1297 | JCM21714_3973 | Diguanylate cyclase/phosphodiesterase. | Two-component response regulator. | 0.898 |
GAE92308.1 | GAE94784.1 | JCM21714_1297 | JCM21714_3974 | Diguanylate cyclase/phosphodiesterase. | Two-component sensor histidine kinase BceS. | 0.972 |
GAE92308.1 | GAE94866.1 | JCM21714_1297 | JCM21714_4065 | Diguanylate cyclase/phosphodiesterase. | Hypothetical protein. | 0.999 |
GAE93262.1 | GAE92308.1 | JCM21714_2329 | JCM21714_1297 | Two-component response regulator. | Diguanylate cyclase/phosphodiesterase. | 0.898 |
GAE93262.1 | GAE93934.1 | JCM21714_2329 | JCM21714_3055 | Two-component response regulator. | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | 0.998 |
GAE93262.1 | GAE93935.1 | JCM21714_2329 | JCM21714_3056 | Two-component response regulator. | Hypothetical protein. | 0.894 |
GAE93262.1 | GAE93937.1 | JCM21714_2329 | JCM21714_3058 | Two-component response regulator. | serine/Threonine protein kinase and Signal Transduction Histidine Kinase with GAF and PAS/PAC sensor. | 0.980 |
GAE93262.1 | GAE94306.1 | JCM21714_2329 | JCM21714_3453 | Two-component response regulator. | Sensory box histidine kinase. | 0.955 |
GAE93262.1 | GAE94784.1 | JCM21714_2329 | JCM21714_3974 | Two-component response regulator. | Two-component sensor histidine kinase BceS. | 0.904 |
GAE93262.1 | GAE94788.1 | JCM21714_2329 | JCM21714_3978 | Two-component response regulator. | Bacitracin export permease protein BceB. | 0.488 |
GAE93262.1 | GAE94866.1 | JCM21714_2329 | JCM21714_4065 | Two-component response regulator. | Hypothetical protein. | 0.999 |
GAE93934.1 | GAE92308.1 | JCM21714_3055 | JCM21714_1297 | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | Diguanylate cyclase/phosphodiesterase. | 0.999 |
GAE93934.1 | GAE93262.1 | JCM21714_3055 | JCM21714_2329 | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | Two-component response regulator. | 0.998 |
GAE93934.1 | GAE93935.1 | JCM21714_3055 | JCM21714_3056 | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | Hypothetical protein. | 0.999 |
GAE93934.1 | GAE93937.1 | JCM21714_3055 | JCM21714_3058 | serine/Threonine protein kinase and Signal Transduction Histidine Kinase. | serine/Threonine protein kinase and Signal Transduction Histidine Kinase with GAF and PAS/PAC sensor. | 0.999 |
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