STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312565_02791Unannotated protein. (67 aa)    
Predicted Functional Partners:
GCA_001312565_02792
Unannotated protein.
 
     0.946
GCA_001312565_05153
Unannotated protein.
    
 0.819
GCA_001312565_05154
Unannotated protein.
    
 0.819
GCA_001312565_06242
Unannotated protein.
    
 0.819
GCA_001312565_06243
Unannotated protein.
    
 0.819
GCA_001312565_06244
Unannotated protein.
    
 0.819
GCA_001312565_02257
Unannotated protein.
    
 0.745
GCA_001312565_02258
Unannotated protein.
    
 0.745
GCA_001312565_04871
Unannotated protein.
    
  0.738
GCA_001312565_04872
Unannotated protein.
    
  0.738
Your Current Organism:
Paenibacillus sp. JCM9796
NCBI taxonomy Id: 1298602
Other names: P. sp. JCM 9796, Paenibacillus sp. JCM 9796
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.