STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312565_04283Unannotated protein. (107 aa)    
Predicted Functional Partners:
GCA_001312565_02506
Unannotated protein.
 
  
 0.938
GCA_001312565_05332
Unannotated protein.
  
  
 0.824
GCA_001312565_02082
Unannotated protein.
  
   
 0.774
GCA_001312565_03198
Unannotated protein.
  
   
 0.770
GCA_001312565_03518
Unannotated protein.
  
     0.770
GCA_001312565_04682
Unannotated protein.
  
   
 0.748
GCA_001312565_02466
Unannotated protein.
  
   
 0.729
GCA_001312565_04285
Unannotated protein.
 
     0.701
GCA_001312565_04143
Unannotated protein.
  
     0.695
GCA_001312565_07396
Unannotated protein.
  
  
 0.685
Your Current Organism:
Paenibacillus sp. JCM9796
NCBI taxonomy Id: 1298602
Other names: P. sp. JCM 9796, Paenibacillus sp. JCM 9796
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