STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312565_05687Unannotated protein. (143 aa)    
Predicted Functional Partners:
GCA_001312565_05688
Unannotated protein.
     0.967
GCA_001312565_05686
Unannotated protein.
 
     0.946
GCA_001312565_00556
Unannotated protein.
   
 
  0.906
GCA_001312565_04688
Unannotated protein.
  
 
 0.892
GCA_001312565_04689
Unannotated protein.
  
 
 0.892
GCA_001312565_05693
Unannotated protein.
 
  0.876
GCA_001312565_05696
Unannotated protein.
 
  0.865
GCA_001312565_02864
Unannotated protein.
    
  0.856
GCA_001312565_03090
Unannotated protein.
    
  0.856
GCA_001312565_03760
Unannotated protein.
    
  0.856
Your Current Organism:
Paenibacillus sp. JCM9796
NCBI taxonomy Id: 1298602
Other names: P. sp. JCM 9796, Paenibacillus sp. JCM 9796
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.