STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001312565_06658Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_001312565_06659
Unannotated protein.
 0.999
GCA_001312565_06656
Unannotated protein.
       0.797
GCA_001312565_06657
Unannotated protein.
       0.797
GCA_001312565_06660
Unannotated protein.
 
    0.786
GCA_001312565_06655
Unannotated protein.
       0.672
GCA_001312565_05526
Unannotated protein.
  
   
 0.500
GCA_001312565_05004
Unannotated protein.
  
     0.436
GCA_001312565_06654
Unannotated protein.
       0.407
GCA_001312565_04053
Unannotated protein.
  
    0.403
Your Current Organism:
Paenibacillus sp. JCM9796
NCBI taxonomy Id: 1298602
Other names: P. sp. JCM 9796, Paenibacillus sp. JCM 9796
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.