STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ntrXTwo-component system, NtrC family, nitrogen regulation response regulator NtrX. (450 aa)    
Predicted Functional Partners:
ntrY
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY.
 0.991
glnL
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
 
 0.866
rpoN
RNA polymerase sigma-54 factor.
 
  
 0.806
TST_1043
Two-component hybrid sensor and regulator; GAF domain protein.
 
 0.803
atoS
Two-component system, NtrC family, sensor histidine kinase AtoS.
 
 0.786
purN
Phosphoribosylglycinamide formyltransferase 1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.773
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
       0.773
TST_0776
Two-component system sensor histidine kinase.
 
 
 0.736
flhG
Flagellar biosynthesis protein FlhG.
  
 
 0.678
cheA
Two-component system, chemotaxis family, sensor kinase CheA.
  
 
 0.664
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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