STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_0168Conserved hypothetical protein; 7,8-dihydro-8-oxoguanine triphosphatase EC:3.6.1.-; Belongs to the Nudix hydrolase family. (195 aa)    
Predicted Functional Partners:
gapN
Glyceraldehyde-3-phosphate dehydrogenase (NADP).
  
    0.774
TST_0166
Conserved hypothetical protein.
     
 0.771
fadN
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.573
TST_0169
TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein.
  
    0.564
rplM
Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.547
TST_0163
Conserved hypothetical protein.
       0.519
rpsI
Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.519
fadA
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.512
fadE
acyl-CoA dehydrogenase.
       0.460
hisIE
phosphoribosyl-ATP pyrophosphohydrolase/phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
     
 0.419
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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