STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_0180Hypothetical protein. (599 aa)    
Predicted Functional Partners:
TST_0181
fatty-acyl-CoA synthase.
       0.631
TST_0182
Long-chain acyl-CoA synthetase.
       0.631
hgdB
Similar to R-phenyllactate dehydratase subunit C FldC.
       0.631
hgdA
Similar to R-phenyllactate dehydratase subunit B FldB.
       0.631
hgdC
Similar to R-phenyllactate dehydratase activator FldI.
       0.631
ppx-GppA
Exopolyphosphatase/guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase.
       0.551
glnD
[protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.
       0.551
TST_0177
Hypothetical protein.
       0.452
adh
Alcohol dehydrogenase.
       0.452
TST_0179
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.452
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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