STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_0502Type IV pilus assembly protein PilM. (347 aa)    
Predicted Functional Partners:
TST_0501
Conserved hypothetical protein.
       0.773
mtnU
Carbon-nitrogen hydrolase family protein.
       0.773
pilQ
Type IV pilus assembly protein PilQ.
 
 
 0.694
pilO
Type IV pilus assembly protein PilO.
  
 
 0.593
TST_0142
Hypothetical protein.
  
 
 0.570
TST_0500
Rubrerythrin.
       0.550
lpxC
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.
       0.525
mshM
MSHA biogenesis protein MshM.
 
    0.492
TST_1647
Hypothetical protein.
    
   0.463
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.