STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_0570Polysaccharide deacetylase family protein. (304 aa)    
Predicted Functional Partners:
bax
Bax protein.
 
     0.946
lasT
tRNA/rRNA methyltransferase.
       0.773
TST_1058
Polysaccharide deacetylase family protein.
  
     0.726
TST_1307
Conserved hypothetical protein.
  
     0.726
TST_0335
Conserved hypothetical protein.
  
     0.602
TST_0568
Hypothetical protein.
       0.539
TST_0518
Competence/damage-inducible protein CinA; Belongs to the CinA family.
 
   
 0.409
amiA
N-acetylmuramoyl-L-alanine amidase.
     
 0.407
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.