STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gctBGlutaconate CoA-transferase, subunit B. (256 aa)    
Predicted Functional Partners:
gctA
Glutaconate CoA-transferase, subunit A.
 0.999
TST_1026
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.806
mcmA2
methylmalonyl-CoA mutase, C-terminal domain.
       0.755
argK
LAO/AO transport system kinase.
       0.754
TST_1020
Short-chain acyl-CoA dehydrogenase.
  
  
 0.739
TST_1022
methylmalonyl-CoA mutase, N-terminal domain.
       0.730
TST_1021
cob(I)alamin adenosyltransferase.
       0.701
fadN
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.644
TST_0383
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.523
maeB
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
  
 0.489
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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