STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_1208Alpha-amylase. (654 aa)    
Predicted Functional Partners:
TST_1205
Glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
 
  
  0.976
glgP
Starch phosphorylase.
 
 
 0.928
TST_1209
Glycoside hydrolase, family 57.
 
     0.921
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
 
  0.915
galU
UTP--glucose-1-phosphate uridylyltransferase.
     
  0.900
galT
UDPglucose--hexose-1-phosphate uridylyltransferase.
 
     0.887
gmpP
Mannose-1-phosphate guanylyltransferase.
 
   
 0.873
TST_1206
Hypothetical protein.
       0.773
TST_1211
Conserved hypothetical protein.
       0.757
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.