STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_1290Conserved hypothetical protein. (99 aa)    
Predicted Functional Partners:
TST_1289
Conserved hypothetical protein.
       0.773
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.563
TST_1292
D-beta-D-heptose 1-phosphate adenosyltransferase; C-terminus of RfaE bifunctional protein.
       0.563
TST_1293
D-beta-D-heptose 7-phosphate kinase; N-terminus of RfaE bifunctional protein.
       0.563
TST_1294
NADPH-dependent FMN reductase.
       0.563
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.563
thrS
threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.502
pilE
Type IV pilus assembly protein PilE.
       0.498
pilA
Type IV pilus assembly protein PilA; Prepilin peptidase dependent protein D.
       0.498
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.