STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TST_1569Signal transduction protein; Diguanylate cyclase DgcB, GGDEF domain protein. (360 aa)    
Predicted Functional Partners:
htpX
Heat shock protein HtpX; Belongs to the peptidase M48B family.
       0.773
TST_1567
Peptidase M24.
       0.678
tlyA
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase.
       0.507
TST_1566
Lysine 2,3-aminomutase.
       0.507
TST_1735
Signal transduction protein; PAS/GGDEF/EAL domain protein.
  
 
 0.466
TST_0312
Signal transduction protein; GAF/GGDEF/EAL domain protein.
  
 
 0.418
TST_1075
Signal transduction protein; GGDEF/EAL domain protein.
  
 
 0.418
TST_1585
Signal transduction protein; PAS/GGDEF/EAL domain protein.
  
 
 0.418
Your Current Organism:
Thermosulfidibacter takaii
NCBI taxonomy Id: 1298851
Other names: T. takaii ABI70S6, Thermosulfidibacter takaii ABI70S6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.