STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425945_00389Unannotated protein. (395 aa)    
Predicted Functional Partners:
GCA_000425945_00391
Unannotated protein.
       0.774
GCA_000425945_00390
Unannotated protein.
       0.773
GCA_000425945_04976
Unannotated protein.
    
  0.741
GCA_000425945_03429
Unannotated protein.
    
  0.734
GCA_000425945_04293
Unannotated protein.
  
     0.671
GCA_000425945_04853
Unannotated protein.
  
     0.656
GCA_000425945_02274
Unannotated protein.
    
  0.632
GCA_000425945_03071
Unannotated protein.
  
     0.628
GCA_000425945_00260
Unannotated protein.
  
     0.546
GCA_000425945_00392
Unannotated protein.
       0.536
Your Current Organism:
Solirubrobacter sp. URHD0082
NCBI taxonomy Id: 1298857
Other names: S. sp. URHD0082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.