STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425945_00491Unannotated protein. (391 aa)    
Predicted Functional Partners:
GCA_000425945_00490
Unannotated protein.
 
  
 0.962
GCA_000425945_00489
Unannotated protein.
 
 0.883
GCA_000425945_02531
Unannotated protein.
  
 0.819
GCA_000425945_02534
Unannotated protein.
  
 
 0.781
GCA_000425945_05610
Unannotated protein.
    
  0.732
GCA_000425945_02502
Unannotated protein.
  
 0.717
GCA_000425945_00488
Unannotated protein.
       0.714
GCA_000425945_00487
Unannotated protein.
 
  
  0.648
GCA_000425945_02532
Unannotated protein.
  
  
 0.607
GCA_000425945_02181
Unannotated protein.
 
 0.546
Your Current Organism:
Solirubrobacter sp. URHD0082
NCBI taxonomy Id: 1298857
Other names: S. sp. URHD0082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.