STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425945_02724Unannotated protein. (1036 aa)    
Predicted Functional Partners:
GCA_000425945_04909
Unannotated protein.
    
  0.911
GCA_000425945_03611
Unannotated protein.
    
  0.909
GCA_000425945_04815
Unannotated protein.
   
  0.908
GCA_000425945_05218
Unannotated protein.
  
 0.830
GCA_000425945_01571
Unannotated protein.
  
 
  0.822
GCA_000425945_01119
Unannotated protein.
    
 0.810
GCA_000425945_03182
Unannotated protein.
 
 
 0.800
GCA_000425945_03379
Unannotated protein.
 
 
0.759
GCA_000425945_02718
Unannotated protein.
 
 
0.758
GCA_000425945_02306
Unannotated protein.
    
  0.744
Your Current Organism:
Solirubrobacter sp. URHD0082
NCBI taxonomy Id: 1298857
Other names: S. sp. URHD0082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.