STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425945_02999Unannotated protein. (68 aa)    
Predicted Functional Partners:
GCA_000425945_04565
Unannotated protein.
 
 
 0.881
GCA_000425945_03000
Unannotated protein.
 
  
 0.867
GCA_000425945_06169
Unannotated protein.
    
 0.819
GCA_000425945_03496
Unannotated protein.
   
 0.806
GCA_000425945_03878
Unannotated protein.
  
 
 0.804
GCA_000425945_03001
Unannotated protein.
       0.738
GCA_000425945_03002
Unannotated protein.
       0.716
GCA_000425945_03003
Unannotated protein.
       0.706
GCA_000425945_03637
Unannotated protein.
 
 
 0.701
GCA_000425945_04566
Unannotated protein.
 
 
 0.672
Your Current Organism:
Solirubrobacter sp. URHD0082
NCBI taxonomy Id: 1298857
Other names: S. sp. URHD0082
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.