STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000425945_05410Unannotated protein. (172 aa)    
Predicted Functional Partners:
GCA_000425945_05458
Unannotated protein.
    
 0.891
GCA_000425945_05724
Unannotated protein.
    
 0.891
GCA_000425945_02409
Unannotated protein.
    
 0.825
GCA_000425945_02736
Unannotated protein.
  
  
 0.795
GCA_000425945_03147
Unannotated protein.
   
    0.784
GCA_000425945_05411
Unannotated protein.
       0.550
GCA_000425945_04538
Unannotated protein.
      
 0.538
GCA_000425945_02673
Unannotated protein.
  
    0.408
GCA_000425945_04544
Unannotated protein.
  
    0.408
Your Current Organism:
Solirubrobacter sp. URHD0082
NCBI taxonomy Id: 1298857
Other names: S. sp. URHD0082
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.