STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426005_02726Unannotated protein. (421 aa)    
Predicted Functional Partners:
GCA_000426005_02725
Unannotated protein.
  
    0.759
GCA_000426005_02724
Unannotated protein.
    
  0.728
GCA_000426005_02727
Unannotated protein.
       0.706
GCA_000426005_01690
Unannotated protein.
  
  
 
0.695
GCA_000426005_01550
Unannotated protein.
  
  
 
0.665
GCA_000426005_02217
Unannotated protein.
    
  0.636
GCA_000426005_02756
Unannotated protein.
 
  
 0.620
GCA_000426005_01959
Unannotated protein.
    
  0.575
GCA_000426005_02348
Unannotated protein.
    
 0.530
GCA_000426005_02266
Unannotated protein.
    
  0.522
Your Current Organism:
Lysobacter sp. URHA0019
NCBI taxonomy Id: 1298861
Other names: L. sp. URHA0019
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.