STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000426065_00108Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_000426065_00106
Unannotated protein.
  
  
 0.897
GCA_000426065_02710
Unannotated protein.
    
 0.725
GCA_000426065_00107
Unannotated protein.
       0.644
GCA_000426065_01616
Unannotated protein.
   
 
 0.629
GCA_000426065_04385
Unannotated protein.
   
 
 0.629
GCA_000426065_05744
Unannotated protein.
   
 
 0.629
GCA_000426065_03231
Unannotated protein.
   
   0.611
GCA_000426065_00109
Unannotated protein.
     
 0.484
GCA_000426065_00105
Unannotated protein.
   
   0.480
GCA_000426065_02694
Unannotated protein.
    
  0.476
Your Current Organism:
Mycobacterium sp. URHD0025
NCBI taxonomy Id: 1298864
Other names: M. sp. URHD0025
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.