STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS47704.1Phospholipase/carboxylesterase. (221 aa)    
Predicted Functional Partners:
mioC
MioC protein.
  
  
  0.807
yhfA-2
Putative redox protein.
       0.757
yrdC-2
L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.690
CUS49465.1
Enoyl-CoA hydratase/carnithine racemase.
 
      0.664
CUS48054.1
Aromatic ring-opening dioxygenase, catalytic subunit, LigB family.
      0.653
ibpA
Molecular chaperone IbpA; Belongs to the small heat shock protein (HSP20) family.
       0.502
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.