STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS47917.1RHS repeat-associated core domain-containing protein. (133 aa)    
Predicted Functional Partners:
CUS47916.1
Hypothetical protein.
       0.773
CUS47918.1
Hypothetical protein.
       0.558
CUS47231.1
Hypothetical protein.
   
 
 0.519
CUS47915.1
Hypothetical protein.
  
    0.490
CUS47911.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
       0.480
CUS47912.1
Bile acid:Na+ symporter, BASS family.
       0.480
CUS47913.1
UDP-glucose 4-epimerase.
       0.480
sdh
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.480
CUS47920.1
Sel1 repeat-containing protein.
  
    0.439
CUS49000.1
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits.
  
    0.409
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.