STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS48150.1Hypothetical protein. (604 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.794
pheA
Chorismate mutase.
       0.680
dps
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
       0.523
udk
Uridine kinase.
    
  0.523
CUS48714.1
PA domain-containing protein.
  
     0.517
CUS48178.1
PA domain-containing protein.
  
     0.494
CUS47738.1
DNA-binding transcriptional regulator, MarR family.
 
     0.428
deoD
Purine-nucleoside phosphorylase.
    
  0.407
CUS48148.1
UPF0176 protein; Belongs to the UPF0176 family.
       0.404
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.