STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS48368.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (214 aa)    
Predicted Functional Partners:
CUS49211.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.998
CUS48069.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.996
CUS48025.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.995
CUS48307.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.995
CUS49214.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.995
arcB
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
 0.992
CUS47228.1
Na+/proline symporter.
 
 0.990
CUS47904.1
Na+/proline symporter.
 
 0.990
CUS49219.1
PAS domain S-box-containing protein.
 
 0.989
CUS48646.1
PAS domain S-box-containing protein.
  
 0.986
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.