STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS48394.1Two component transcriptional regulator, LuxR family. (206 aa)    
Predicted Functional Partners:
arcB
HPt (histidine-containing phosphotransfer) domain-containing protein.
   
 0.992
CUS47904.1
Na+/proline symporter.
 
 
 0.966
CUS47228.1
Na+/proline symporter.
 
 
 0.965
CUS49219.1
PAS domain S-box-containing protein.
 
 
 0.942
CUS48302.1
Signal transduction histidine kinase.
 
 0.935
CUS48646.1
PAS domain S-box-containing protein.
  
 0.909
CUS48069.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.904
CUS48395.1
Hypothetical protein.
       0.784
CUS47286.1
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.
    
 0.780
CUS47747.1
Two-component system, NarL family, nitrate/nitrite response regulator NarL.
  
     0.774
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.