STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadGHypothetical protein. (496 aa)    
Predicted Functional Partners:
tadD
Tetratricopeptide repeat-containing protein.
       0.773
tadA
Pilus assembly protein CpaF.
       0.705
tadB
Tight adherence protein B.
       0.705
tadC
Type II secretion system (T2SS), protein F.
       0.705
CUS48811.1
Hypothetical protein.
       0.705
rcpC
Flp pilus assembly protein CpaB.
       0.645
rcpA
Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
       0.645
CUS48802.1
Hypothetical protein.
       0.604
CUS48803.1
Hypothetical protein.
       0.604
CUS48804.1
Hypothetical protein.
       0.604
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.