STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUS49413.1PA domain-containing protein. (565 aa)    
Predicted Functional Partners:
dpp4
Dipeptidyl-peptidase Dpp4.
  
     0.698
CUS49412.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
       0.682
CUS49080.1
Murein tripeptide amidase MpaA.
  
     0.662
CUS49414.1
Iron complex outermembrane recepter protein.
 
     0.662
CUS49449.1
TonB dependent receptor.
  
     0.606
CUS47899.1
TonB-dependent Receptor Plug Domain.
  
     0.593
dpep1
Membrane dipeptidase.
     0.590
CUS49326.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
  
     0.586
CUS47906.1
Iron complex outermembrane recepter protein.
  
     0.560
CUS48387.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.513
Your Current Organism:
Idiomarinaceae bacterium HL53
NCBI taxonomy Id: 1298881
Other names: I. bacterium HL-53, Idiomarina sp. HL-53, Idiomarinaceae bacterium HL-53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.