STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002543ATP-binding cassette transporter abc2. (427 aa)    
Predicted Functional Partners:
J056_002542
Multidrug resistance-associated protein 1.
 
     0.948
J056_004694
Elongation factor 3; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.494
J056_001752
Nonribosomal peptide synthetase 2.
  
  
 0.443
J056_002027
mRNA export factor elf1.
   
 
 0.412
J056_001169
Leptomycin B resistance protein pmd1.
   
 0.408
J056_000313
Leptomycin B resistance protein pmd1.
   
 0.408
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.