STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001850Serine palmitoyltransferase 1. (528 aa)    
Predicted Functional Partners:
J056_002948
Serine palmitoyltransferase 2.
  
0.999
J056_000941
3-ketodihydrosphingosine reductase TSC10.
     
 0.989
J056_000750
Uncharacterized protein.
    
 
 0.953
J056_000835
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.935
J056_000521
WD repeat-containing protein wat1.
     
  0.900
J056_004577
WD repeat-containing protein mip1.
     
  0.900
J056_004374
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.898
J056_003171
1,3-beta-glucan synthase component FKS1.
 
  
   0.895
J056_004389
Tryptophan synthase.
    
 0.886
J056_001099
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.843
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.