STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001593Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (344 aa)    
Predicted Functional Partners:
J056_003827
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.733
J056_000330
Histone chaperone ASF1.
    
 0.720
J056_000911
SEC14 cytosolic factor.
    
  0.495
J056_004768
Sec14 cytosolic factor.
    
  0.495
J056_002300
CRAL-TRIO domain-containing protein.
    
  0.495
J056_003698
Rhamnolipids biosynthesis 3-oxoacyl-reductase.
  
  
 0.466
J056_003987
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
  
 0.459
J056_002324
BUD22 domain-containing protein.
   
 
 0.453
J056_002504
Uncharacterized protein.
   
 0.450
J056_003260
AP-2 complex subunit mu-A; Belongs to the adaptor complexes medium subunit family.
    
 0.436
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.