STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001035Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (237 aa)    
Predicted Functional Partners:
J056_000197
Uncharacterized protein.
  
  
 0.936
J056_004309
Uncharacterized protein.
  
  
 
0.903
J056_001488
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.746
J056_001357
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.740
J056_003523
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.728
J056_003509
Uncharacterized protein.
   
   0.727
J056_002510
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.721
J056_002392
MRP-L46 domain-containing protein.
   
 
 0.712
J056_002531
30S ribosomal protein S17.
   
 
 0.708
J056_001992
Uncharacterized protein.
   
 
 0.688
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.