STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000858Type 1 phosphatases regulator ypi1. (124 aa)    
Predicted Functional Partners:
J056_001224
Septation initiation network scaffold protein cdc11.
   
 
 0.927
J056_000613
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.848
J056_002933
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.813
J056_001114
UBX domain-containing protein 3.
   
 
 0.689
J056_002445
Serine/threonine-protein phosphatase.
    
 
 0.489
J056_001058
Serine/threonine-protein phosphatase.
    
 
 0.489
J056_003853
Serine/threonine-protein phosphatase.
    
 
 0.489
J056_003347
Serine/threonine-protein phosphatase.
    
 
 0.489
J056_001970
Serine/threonine-protein phosphatase.
    
 
 0.489
J056_002465
Microsomal glutathione S-transferase 3.
    
 
 0.476
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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