STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000972Inositol phosphorylceramide synthase. (472 aa)    
Predicted Functional Partners:
J056_002948
Serine palmitoyltransferase 2.
   
 
 0.545
J056_001850
Serine palmitoyltransferase 1.
   
 
 0.531
J056_002324
BUD22 domain-containing protein.
   
 
 0.453
J056_002504
Uncharacterized protein.
   
 0.450
J056_000836
Inositol phoshorylceramide synthase regulatory subunit kei1.
    
 
 0.440
J056_000197
Uncharacterized protein.
 
 
  
 0.433
J056_000223
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
 
 
    0.429
J056_002198
Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.
   
 
 0.416
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.