STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000665Protein transport protein sec1; Belongs to the STXBP/unc-18/SEC1 family. (833 aa)    
Predicted Functional Partners:
J056_004373
Syntaxin-like protein psy1.
   
 0.998
J056_004403
Protein transport protein sec9.
   
 0.978
J056_000190
Synaptobrevin-like protein 1.
    
 0.976
J056_000098
Exocyst complex component sec6.
   
 0.791
J056_004483
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 0.758
J056_004711
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.691
J056_002209
Putative exocyst complex component sec8.
    
 0.676
J056_002833
Sod_Cu domain-containing protein.
    
  0.649
J056_003720
Uncharacterized protein.
   
 
  0.643
J056_003102
Vesicular-fusion protein sec18.
   
 
 0.640
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.