STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000766Sorbitol dehydrogenase. (372 aa)    
Predicted Functional Partners:
J056_002472
Putative NADP-dependent mannitol dehydrogenase.
 
 
 
 0.923
J056_004249
NADP-dependent mannitol dehydrogenase.
 
 
 
 0.923
J056_003684
D-arabinitol 2-dehydrogenase.
 
 
 
 0.923
J056_001033
Phosphotransferase.
   
 
 0.919
J056_000046
Phosphotransferase.
   
 
 0.913
J056_000454
Sorbitol dehydrogenase.
  
  
 
0.907
J056_002227
Sorbitol dehydrogenase.
  
  
 
0.906
J056_002926
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 0.656
J056_004389
Tryptophan synthase.
     
 0.631
J056_003305
Putative D-xylulose kinase A.
  
 
 0.580
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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