STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000469Endocytosis protein end4. (1063 aa)    
Predicted Functional Partners:
J056_002897
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.954
J056_000717
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.949
J056_001112
ENTH domain-containing protein C19F8.03c.
    
 0.858
J056_002169
Epsin-3.
    
 
 0.857
J056_004785
Wiskott-Aldrich syndrome protein-like protein 1.
    
 
 0.739
J056_003242
Serine/threonine-protein kinase ppk30.
   
 0.732
J056_003012
WAS/WASL-interacting protein family member 3.
    
 
 0.721
J056_002343
UBA domain-containing protein 7.
   
 0.717
J056_000824
Pre-mRNA-splicing factor SLU7.
 
      0.715
J056_001017
Drebrin-like protein.
    
 
 0.711
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.