STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000460Kinetochore protein spc7. (1534 aa)    
Predicted Functional Partners:
J056_003779
Mitotic checkpoint protein BUB3.
    
 0.948
J056_000512
Kinetochore protein mis13.
    
 
 0.925
J056_000416
Checkpoint serine/threonine-protein kinase BUB1.
    
 0.923
J056_004272
Recombining binding protein suppressor of hairless-like protein.
    
 0.800
J056_001696
Putative kinetochore protein spc24.
    
 
 0.739
J056_002064
Guanine nucleotide-exchange factor SEC12.
    
 0.659
J056_003590
Endosomal protein P24B.
    
 0.597
J056_000921
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.580
J056_002134
Protease KEX1; Belongs to the peptidase S8 family.
   
 0.577
J056_002929
Putative kinetochore protein NDC80.
    
 
 0.534
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.