STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000475Phosphoribosylaminoimidazole carboxylase; In the C-terminal section; belongs to the AIR carboxylase family. Class I subfamily. (602 aa)    
Predicted Functional Partners:
J056_000670
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
   
 
 0.989
J056_003784
ATP-grasp domain-containing protein.
 
 0.985
J056_001262
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.975
J056_002133
Amidophosphoribosyltransferase.
 
 0.964
J056_001632
Phosphoribosylformylglycinamidine synthase.
  
 0.947
J056_003091
Phosphoribosylglycinamide formyltransferase.
 
 0.864
J056_002904
MGS domain-containing protein.
  
 
 0.863
J056_004756
Formyltetrahydrofolate deformylase.
  
 0.792
J056_002521
C-1-tetrahydrofolate synthase, cytoplasmic.
  
 
 0.774
J056_000977
Histidine biosynthesis trifunctional protein.
  
 
 0.751
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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