STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000512Kinetochore protein mis13. (566 aa)    
Predicted Functional Partners:
J056_000232
Kinetochore protein spc25.
    
 0.955
J056_001696
Putative kinetochore protein spc24.
    
 
 0.942
J056_000460
Kinetochore protein spc7.
    
 
 0.925
J056_002929
Putative kinetochore protein NDC80.
    
 0.757
J056_000210
Cleft lip and palate transmembrane protein 1-like protein.
    
 
 0.622
J056_003286
Uncharacterized protein.
    
 0.554
J056_003845
Anucleate primary sterigmata protein A.
    
 
 0.504
J056_000853
DASH complex subunit DAM1.
    
   0.495
HOG1A
Mitogen-activated protein kinase HOG1A; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes.
    
 0.465
HOG1B
Mitogen-activated protein kinase HOG1B; Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes.
    
 0.465
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.