STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004652Eukaryotic translation initiation factor 2D. (586 aa)    
Predicted Functional Partners:
J056_003652
Guanine nucleotide-binding protein subunit beta-like protein.
    
   0.727
J056_001763
40S ribosomal protein S4-A.
    
   0.677
J056_003044
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.648
J056_002186
Translation machinery-associated protein 22.
    
 
 0.645
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
 
 0.628
J056_004493
Putative gamma-glutamyl phosphate reductase.
    
  0.596
J056_000909
Protein translation factor SUI1.
    
 
 0.571
J056_002440
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
    
 
 0.568
J056_002274
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.545
J056_001192
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
 
 0.542
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.